Max's seizures increase. Low on her medication after her friends mistakenly flush it down the toilet, Max breaks into a drug clinic. She is caught and ends up in jail and more openly a target for Lydecker. When her friends find out, Cindy gets herself arrested in order to help Max break out. Meanwhile, Lydecker closes in on Max. With the help of a stranger Cindy and Max manage to breakout. Lydecker's efforts to trap Max are again thwarted by Logan's tactics.

Max comes to Sketchy's rescue after he loses a mobstar's money filled package. Meanwhile, Logan is approached by a young woman who wants him to locate her missing father but has a hidden agenda.

Max attends conference about genetic engineering. She sees Lydecker at the conference, but he doesn't recognize her. Before she can slip away unseen, the conference attendees are taken hostage by a group of anti-genetic engineering terrorists. Max can't use her abilities to escape for fear of being noticed. Logan negotiates to free the women and children in exchange for himself. Max is able to intervene to save Logan from an almost certain death. She takes out Lydecker in the process and stops the terrorists. Meanwhile at Jam Pony, the gang are riveted by the television coverage of the hostage situation and unaware that Max is involved. Herbal insists the terrorist situation is all part of God's plan.

Lydecker gets the local police to post ""Wanted"" posters of Max throughout the city, charging her with Vogelsang's murder. Zack returns to beg Max to leave town. Logan offers Max and Zack shelter in a countryside retreat. While saying good-bye, their attraction to each other comes to the surface and Logan and Max kiss. Zack tries again to convince Max to run away with him. Just as she's ready to do it, she learns Logan is near death. Max heads back to Seattle to give Logan a blood transfusion. Though she puts her own life at risk, she does save Logan's life. Lydecker and the police close in on finding Max; however, the real murder confesses. It's Zack who turns himself in to police in order to spare Max. The helicopter transporting Zack back to Manticore mysteriously explodes. No one knows if Zack was killed. Meanwhile, Logan discovers the feeling has partially returned to his paralyzed leg. And, Sketchy is put in charge at Jam Pony. He seizes the opportunity to make himself look li

Tired of Logan's ""all business"" approach to their relationship, Max refuses to help with his latest case involving a medical supply smuggler. But when Logan gets double-crossed by his target, Max goes undercover as ""Eyes Only"" to rescue him from a certain death. Meanwhile, Normal is smitten with a woman with a secret.

Max accompanies Logan to a once-thriving community, now devastated after the pulse, to meet with the town's retired sheriff (his Eyes Only) contact. The locals are hostile toward Max and Logan, believing them to be hold-overs from the pre-pulse days. While Logan is meeting with his contact, Max starts to feel ill and having seizures. She befriends a local teen who Max comes to realize is alienated from the rest of the town. Max sees burn marks on the boy's hands. Then the boy is threatened with his life for talking to her. Max asks Logan to help her dig deeper to uncover what appears to be a conspiracy of silence. Max and Logan find out the boy is the only survivor of an affluent family attacked and killed by an angry mob of townspeople after the pulse. Max becomes debilitated by a seizure. Logan heroically overcomes his disability by using his wits to fend off a mob determined to keep the truth a secret. Logan succeeds in bringing the truth to light and helping the boy discover

Max and Logan must set aside their complicated and lethal feelings for one another, when they investigate a series of unusual deaths and uncover a genocidal agenda linked to transgenic escapees.

A genetically enhanced hypnotist targets Logan and Max, who reveals her true identity and Logan's secret activities before realizing that she is being manipulated as part of a deadly plan - but luckily she doesn't remember doing it. Meanwhile, the transgenic, Mia, also sets her sights on Alec, raising the stakes, leading him back into the boxing ring to make some money for some not-so-good fellas.