Sonoko has decided to introduce Makoto to her parents. But while her father wholly approves of Makoto, especially as he is a fan of martial arts competitions himself, her mother, in turn, is strictly against a union between her younger daughter, as the prospective heir of the Suzuki Corporation, and an (in her eyes) uneducated, fight-obsessed never-do-wel.

Jirokichi learns of Makoto's victory record and swiftly changes his mind about the young man's offer and sends a demonstration video to Superintendent Chaki and Inspector Nakamori. However, amidst the slack-jawed policemen witnessing Makoto's fighting prowess lurks Kaitou Kid in disguise, who merely shows amusement at this new, if unusual challenge

A man was found murdered inside on his apartment! What love story will continue to develop among the Metropolitan police this time?!

Conan, Detective Takagi and Detective Sato are solving the mystery of the murder and tries to deduce who is murderer.

The Detective Boys are invited on the yacht of a wealthy businessman in Shinta City. The owner's wife invited the group to eat on the boat. During lunch, the woman shows guys two videos: one in which the husband swims with the help of a tablet and one in which the man has finally learned to swim. After a few hours, the boys see the entrepreneur jump into the sea and drown.

Three different people have come forward claiming Taii belongs to them. Now it's up to the group to determine who is telling the truth.

After unlocking the door, Conan runs into the bedroom to find Teishi barely breathing after apparently falling off a chair and hitting his head while fixing a light, but something doesn't seem quite right...

Ran visits her former school friend who now lives in a shared apartment house that goes by a bunch of scheduled rules. When Kogoro and Conan arrive to pick her up, one of the housemates is found dead on her bed, and suspicion is placed on the sole male housemate who had argued with her earlier.

Conan, Ran, Sonoko, and Masami walk through the woods to a villa where Masami's brother was called to investigate the mystery of the Red Woman, a person who 15 years ago had murdered her husband because he had an affair and is reputed to be haunting the area. They meet with a group of friends who have made an annual visit to the villa because their friend Satoko died 3 years ago after which they have found her dead body. They describe how every year they had experienced strange events related to the Red Woman such as a window breaking and a room with red apples, a water heater filled with red rose petals, and a big splotch of red paint on their door. While Conan and Sera investigate the Red Woman's appearances in the woods, Ran, Sonoko, and the rest of the group split off to do house chores. When Ran, Sonoko, and one of the women Masaie go to take a bath, they found Hakuya (one of the guys) dead in a bath full of tomatoes.

Yui Uehara of the Nagano police arrives and learns of the murder case and details, such as the fact that no blood traces where found in the bathroom. As the other guests are in distraught over Masaie's death, their whereabouts are told to the detective. Why were tomatoes floating in the bathtub?

A search is conducted they don't find any knife-like objects or wigs. A woman is seen lurking outside again. The group checks some pictures which point to the red hints of all the previous 'pranks'. In one the pictures, Yui points out that on the day she was found she was wearing a red coat. She notices the ones who found the knife 3 years ago were Kansuke Yamato and Taka'aki Morofushi, while they were still attending police academy. Morofushi was sure that the bones which were found belonged to the red woman, while Yamato refused to accept it.

After an unlucky while at the pachinko salon, Kogoro who walks about sees Conan at a small police office near a train-station. He walks in angrily only to find out that Conan was there only to return a found wallet. As they are about to leave the well-known comedian Rokusuke DoDonPa (real name: Rokusuke Tanigaki) walks in and announces to have murdered his chief.

Conan and Kogoro feel something is wrong with DoDonPa's all too convenient alibi. After taking on the guilt for a murder he didn't commit, DoDonPa becomes the man of the hour for trying to protect the reputation of his benefactor Tendo. Conan begins to strongly suspect him.

Conan, Ran, and Sonoko visit the hotel room where Masumi Sera is living. In the hallway on the 30th floor of Sera's hotel, various editors wait for famous romance author Hiura Keigo to finish his manuscripts. Later, Hiura's assistant Minazuki Chiori is found murdered in the room directly below Hiura's.

Author Keigo Hiura's assistant Chiaki Minazuki is found strangled to death in a hotel room directly below his. Conan and Sera are certain he committed the crime, but cannot find a hole in his alibi. After learning of the condition of Minazuki's room they get closer to the truth. After seeing and hearing more, Conan and Sera realize how Hiura manipulated his alibi...

The Detective Boys participate in a kite competition, hoping to advertise their business. Ai hums a tune that gets the others curious as to what she is listening to, but she says that's a secret, challenging Conan to try to figure it out. Conan plans to have Ayumi try to record it, but she accidentally reveals to Ai the trick but then realizes she had lost her phone. During the competition, one of the guys who had attracted trouble with some of his associates as well as his wife is backing up while holding a kite, but falls over a high ledge into a river where he nearly drowns. Conan and the kids suspect foul play, especially when they discover the lengths of the rope barrier do not match.

Conan finds out that the man falling into the river wasn't an accident but a murder attempt. The main suspects are: the man's wife (who he was on the phone at the moment of the crime), his partner, and one of the contestants whose sister was having and affair with him.

Conan, Haibara, Agasa and the Detective Boys spend the weekend at a cottage with the three sisters who own it and the little sister's boyfriend. After dinner, the little sister realized she ran out of medicine and her boyfriend volunteers to walk through the storm to bring her more. Once the storm has ended, everyone decides to look for him since he was taking too long, and they find him dead on the snow.

The Detective Boys are wandering the streets in the residential area around Professor Agasa's house, worrying about Ai Haibara, who has gone missing since she went shopping several hours ago. At first, Genta, Mitsuhiko, and Ayumi are wondering whether Ai has become the victim of a traffic accident, but then Conan finds a cat's shawl lying on the street. Seeing this, he remembers how he, Ai, and the Professor recently met a friendly young woman named Mitsuru Higaki, along with her pet cat Chiro (who wore the shawl) and her Indian Star Tortoise. Searching the vicinity for Chiro, they find the kitten inside a well in a park, but as they try to return it, Mrs. Higaki does not answer the doorbell, so they take the cat back to Agasa's house to feed it. After contacting Detective Chiba to learn whether there have been any accidents in the area (none have), Conan tries to contact Ai through her badge, but to no avail.

Ran, Kogoro and Conan are at the hospital where Eri has had appendix surgery. While coming out, Kogoro and Conan run into Amuro and they find a woman dead from poisoning. They figure out that the woman, Reina, was visiting a sick friend Juri, and they were having tea party with two more friends. The police interrogates each of the suspects, which reveals their possible motive; Tokie's former boyfriend was stolen by Reina and became her current husband, Katsuki lost large amount of money because of the stock that Reina recommended, and Juri's son failed an exam because he caught a cold from Reina's son. The three of them denies wanting to kill the victim, since it is not possible to switch a teacup with different colors of tea to poison her.

Bourbon and Conan help with the investigation and arrive to the conclusion that the culprit must have switched her cup with the victim in order to poison her. There is one problem though: each one of them is drinking a tea of a different color.

Ran, Conan, and Detective Boys are visiting the Beika Aquarium. While Ran is looking at the shark, she starts thinking about an old story, back when Ran and Shinichi visited the Beika Aquarium. Ran questions if Shinichi liked her at that time already as much as he does now. Conan also starts remembering the day back when Ran and him, as Shinichi, visited the place... Shinichi was waiting for Ran inside Beika Aquarium. Ran was late. She tells him that she planned to invite her mother and father to visit the Aquarium for a romantic situation. Shinichi tells Ran not to run but Ran asked why. Shinichi didn't answer her. While Shinichi and Ran were talking, he spots the dead body of Kunihiro Shumoto.

Shinichi helps the police to solve the murder case. As an apology for what happens, he promises Ran that he will take her to the new amusement park, Tropical Land, if she wins the next karate tournament.

Ran and Conan accompany Jirokichi Suzuki to Narita Airport to wait for the arrival of Munch's "Anxiety" and "Despair". Before and after packing, photos are taken to check the authencity. These two paintings were checked to have no defects, so they were packed and transferred to Suzuki Museum by a truck. The three of them get in a car and follow the truck.

Meanwhile, Munch's "Scream" arrived at Haneda Airport, and after it was checked to have no problems using the photos, it was sent to the museum by another truck. However, Hiroshi Numajiri tells Jirokichi that the truck carrying "Scream" drove off course and disappeared.

The Detective Boys and Conan met a group called the Detective Elderlies, who are similar to them. The Detective Elderlies said that they saw a thief with blond hair and followed him into a house, where they saw Kiyomasa Kuroda's corpse. The Detective Elderlies then seemed to have solved the case and said that the blond thief killed Kiyomasa, but Conan is doubting whether that is the truth.

A woman asks Kogoro to find her missing husband, who went to an unknown location to draw and has stopped communicating with her. Thanks to the last picture he sent to his wife, they are able to find the location. When they arrive, they find the missing man dead, with his painting being the only clue of who the culprit may be.

Tooru Amuro witnesses a woman pushed from the top of the stairs at Haido Park. However, he doesn't see the culprit's face. The unconscious and gravely injured woman pushed from the stairs is Jodie Starling's friend and Haido Elementary School teacher Natsuko Shibuya. Conan and Jodie head to the park and determine Natsuko was attacked somewhere else, and it soon becomes clear she was assaulted at the school. Later, Megure and the police question her coworker Yoshiharu Sugamoto, who tried to give Natsuko a ride home, and Akiyo Ueno and Fumiyuki Kandachi, parents of students who had appointments to see Natsuko.

The police review a photo of the answer sheets Natsuko was grading. Jodie and Camel fail to discover any information that could help them solve the crime from the photo, but Amuro and Conan realize who the culprit is after seeing the picture.

When Conan hears Camel's story, he realizes Vermouth disguised herself as Jodie and spoke with him. Conan is frustrated that he acted just as Bourbon (Amuro) and Vermouth planned. Amuro meets with Vermouth, who is still disguised as Jodie. She informs him she learned from Camel that Kusuda shot himself. Amuro responds that there was another burned man who was shot in the head when Kusuda disappeared. With thoughts of FBI agent Akai Shuichi on his mind, Amuro deduces that Akai is still alive.

Amuro visits Okiya at his home and begins explaining how one corpse was swapped out for another. The suspected corpse, Shuichi Akai, was shot in the head and burned along with his car at Raiha Pass. However, Amuro believes Akai switched his own body out for Kusuda's and is in fact still alive. Amuro explains Akai's trick step by step to Okiya. Meanwhile, Jodie was thinking the same thing as Amuro. Amuro reasons the body swap was planned not by Akai but by Conan. Amuro then asks Okiya to remove his mask. He is certain Okiya is Akai, but..

Akai suddenly appears in the back seat of Jodie's car and fires at the secret police's vehicles. The bullet strikes a tire, and the FBI agents successfully shake off the secret police. Meanwhile, at the Kudo family home Amuro's subordinates inform him Akai shot out a tire, causing their cars to crash. Later, Jodie's car returns to the crash site. Akai takes a cell phone from the secret police and begins speaking to Amuro (Bourbon). He tells him it was a mistake to let Conan know he had the nickname Zero. Akai knew who Amuro truly was...