Immediately after becoming the Dark One, Emma disappears and the heroes must band together to save her, but first they have to find her, which will require the help of an unlikely ally. Meanwhile, in the Enchanted Forest, Emma struggles to resist her dark urges as she searches for Merlin in the hope that he can stop her transformation. Along the way to Camelot, she gets help from the plucky and brave warrior princess Merida, as well as King Arthur and his Knights of the Round Table.

After receiving a cryptic warning from Lancelot about Arthur's intentions, Mary Margaret realizes Arthur may be the heroes' biggest threat, but when she is unable to convince David of the danger, she takes matters into her own hands. Meanwhile, Hook's unwavering love for Emma provides a glimmer of hope in her struggle against the unrelenting voice of Rumplestiltskin. In a Camelot flashback, Guinevere senses that Arthur is losing his way, consumed by his obsession with making Excalibur whole, so she sets out with Lancelot on her own quest into the heart of darkness. In Storybrooke, Dark Emma unleashes a secret weapon in the next phase of her plan to find the brave soul she needs to draw Excalibur from the stone.

In Camelot, as Mary Margaret and David attempt to retrieve the Dark One dagger, Emma uses a Dreamcatcher to look into the past to see how Merlin was transformed into a tree. Together, Emma and Regina figure out the critical ingredient they must acquire to free Merlin, but it's a race against Arthur, who does not want Merlin released. Meanwhile, with encouragement from his moms, Henry musters up the courage to ask Violet on a date. Back in Storybrooke, the heroes break into Emma's house hoping to locate Gold, but what they find will give them a glimpse of Emma's end game. Far from prying eyes, Merida sets about the mission Emma has tasked her with and begins molding Gold into the hero they need to draw Excalibur.

In a Camelot flashback, a chance encounter with Merlin, David, Hook and Belle gives Merida new hope in her quest to save her brothers from the usurping clans of DunBroch. Unwilling to leave anything up to fate, Merida brings Belle along on a dangerous journey that culminates with an invaluable lesson in bravery. In Storybrooke, Regina, Mary Margaret and David discover the spell that would allow one of Merlin’s chosen to communicate with him, but when Arthur fails to reach the missing sorcerer the heroes grow suspicious. Meanwhile, Emma commands Merida to kill Belle in hopes of forcing Mr. Gold’s heroic transformation. With Merida unable to disobey Emma’s orders.

Zelena and Arthur journey to DunBroch on a mission to retrieve an enchanted relic that will provide the advantage they need to vanquish Emma and our heroes. Their path will cross with Merida’s, who is on a journey of her own to pay a debt that her father, King Fergus, owed to the Witch when he died. Merida enlists the help of two friends, Mulan and Ruby, but, in order to satisfy the Witch and save DunBroch, she first must discover the identity of the knight who killed her father. In flashbacks, Merida learns about bravery and honor as she trains for combat and rides alongside Fergus into the infamous battle that claims his life.

In a Camelot flashback, Hook becomes a Dark One and his lust for revenge against Rumplestiltskin is reignited. When Emma and Hook disagree about their best course of action, the final pieces of the puzzle are revealed as events in Camelot catch up to the present and we witness a charged confrontation between the forces of light and dark that sends our heroes on a collision course with destiny. Meanwhile, in Storybrooke, Hook’s centuries old lust for revenge against Gold puts both of their fates in jeopardy while Emma’s love faces the ultimate test as she tries to convince Hook to turn away from the darkness before she, Mary Margaret, David and Regina embark on a new mission as an unsuspected evil is released.

Emma, David, Regina, Robin and Henry are finally back home in Storybrooke and reunited with Snow, but, unfortunately, they still have to contend with Hades, who continues to deceive Zelena as he lays out his plan to use the all-powerful Olympian Crystal to take over the town. The heroes desperately search for a way to defeat Hades while Hook does the same in the Underworld, looking for those missing storybook pages. Regina and Robin take a more direct approach, which culminates in an epic showdown that will leave our heroes forever changed.

Regina reels from the death of Robin Hood, and everyone tries to give her room to grieve, but when the heroes discover Gold has stolen Hades’ Olympian Crystal and tethered all of Storybrooke’s magic to it, they set out to stop him. Henry decides he no longer can stand all the pain magic has caused his family, so he goes rogue, with Violet in tow, to destroy magic once and for all. Meanwhile, Zelena, Snow, David, and Hook attempt to open a portal that will return Merida and the other Storybrooke guests to their homes, but things go awry, and the group winds up in a deranged new world.