While Tommy attempts to make reason of the chaos in his life, he continues to defy death while pulling dangerous stunts on the job. Lou admits his infidelity to his wife and receives an unexpected surprise. When tragedy strikes his family, Tommy must come to the rescue of his father.

When Janet needs more money to cover house repairs, Tommy turns to Uncle Teddy and his "little" friend to help him out with extra cash. When Franco's father has a stroke, Franco finds himself trying to juggle work and raising his daughter on his own. Meanwhile, a goodwill tribute to the firefighters lost in 9/11 goes awry and the firehouse is put in jeopardy.

The hockey game rematch between the NYPD and the FDNY is right around the corner and Tommy must figure out a plan to save himself from being pummeled by the cops who have it out for him. Tommy's relationship with Sheila is discovered by the guys and they must adhere to tradition to handle it in their own way. When Tommy is visited by his demons during a fire, Franco comes to his aid... with devastating results.

In the opener to the second season, troubled Tommy Gavin is having a difficult time adjusting to life at his new uneventful firehouse after the volatile split with his old crew. On top of this he is still looking for his missing wife who has kidnapped his three children and he has to come to terms with the fact that his dead cousin’s wife is pregnant with his baby. His frustrations come to a head and he has a meltdown with a street vendor selling 9/11 memorabilia.

In an effort to get more time off to search for his wife and kids, Tommy joins the new firehouse’s Barbershop Quartet. Meanwhile back at the old station, Lou and Chief Reilly conspire to get Tommy back, but the rest of the crew has grown fond of his replacement.

Tommy's fate in the firehouse depends on vote by the crew. Tommy reunites with his dad. Franco and Laura's relationship grows.