A new dangerous enemy of earth, creatures of a strange reptilian race appear before the earth warriors. During the attacks that followed the acid of one of the reptiles hits Jax's cybernatic hands. As a result of it the important microchip gets lost and his hands don't function anymore. Because of this Jax loses his selfconfidence. Sonya returns to the place where battle was fought to find the microchip and help her friend. However a reptile manages to kidnap Sonya. Because there are also other battles to be fought, the Earth Warriors decide to split up: the larger part of the team take of to a kombat with Sheeva's warriors, as for Jax , he starts his search to find his partner, Sonya. In his desire to help Sonya, Jax forgets about cyber hands and defeats the reptile on his own. At the same time the rest of the warriors manage to win their battle too.

In a battle against Shao Kahn's warriors, Sonya behaves herself too self-confidencely. As a result Stryker is seriously wounded. Stryker decides to relieve Sonya of her command because he thinks she can't lead the team. In a next attack they leave on to a base together. The serious ordeal on stability in the form of the Kintaro's detachment is where Sonya takes back her command and rewins Strykers trust.

The Defenders of the Realm are getting ready for the final battle with the forces of evil. For ruling all parts of the dark world Kittana reached an agreement with Sheeva's Warriors. But she doesn't know that she is in fact the cruel Shang Tsung who transformed to look like Sheeva. The good forces break into Shao Kahn's castle and demand that Shao Kahn hands over his rule to the princess. Suddenly Shang Tsung appears with warriors of the real Sheeva. The magician is also after the power the monarch chair. But Tsung forgets one thing, Sheeva has enemies withing the outworld forces. Raiden finds out Shang Tsung's plan and disturbers the fight. The god of thunder brings with him the worst enemy of Sheeva, Motaro's squad. Mortal Kombat continues, but the insurrection failed and The Earth is still in danger.