Motoko is asked by her friend Kurutan to investigate a strange scenario. A six-year old girl's life was saved by an immediate heart transplant. When her parents tried to send their gratitude to the donor, the donor's parents filed a police report since they never gave permission for the donation.

What's more, the investigating officer has now been hospitalized after an accident. There is more to this case then meets the eye and Motoko and her colleagues must find out who's behind these apparent illegal organ donations.

A new sniper device is tested out, but is found to have flaws. While Section 9 attends a debriefing session on the fate of the sniping device, the Tachikomas themselves begin to worry that tomorrow they could be the ones that are scrapped. The Tachikomas of Section 9 unite and discuss the various issues dealing with them that have occurred within previous episodes. They worry that the Major does not appreciate them. At the same time, the Major is looking into the idea of proceeding without the Tachikomas at Section 9's side.

"Machine désirante (Desiring-Machine)" is one of the key concepts of Anti-Œdipus, written by contemporary French philosopher Gilles Deleuze.

Aramaki and Kusanagi attend an international security conference in London. While there, Aramaki visits an old acquaintance of his, who is the operator of a wine fund, a place where people store their wines in order to let the wine age and become more expensive.

Their meeting is not purely a social one, but before Aramaki and his friend can sit down and talk about the old days, the bank is broken into by two mafia men.

Following the events of the "RE-VIEW", Togusa has been rushed to the hospital. Just before he goes into surgery, he passes what he has learned to the rest of his team.

As he fights for his life, his colleagues at Section 9 take over the case to find the vaccine recipient ledger and the person responsible for taking it. However, others in the government are not happy about this investigation. The Drug and Narcotic Suppression Squad, the same unit that had shot Togusa in the previous episode, is again dispatched by the Ministry of Health, Labour, and Welfare in order to find the thief and the ledger before Section 9 does.

While Ishikawa begins to dig deeper into the background of CIS Representative Kazunoto Gouda, the rest of Section 9 are instructed to arrest one Shou Kawashima, a Taiwanese vegetarian restaurant chef who has been seen at three locations where the Individual Eleven have claimed responsibility for attacking.

The Taiwanese restaurant where he works is near the Nanyou Shimbun (Newspaper) building that had received an earlier threat against it by the Individual Eleven. Section 9 moves into position around the Taiwanese restaurant and commences their stakeout.

During a scheduled maintenance, the Tachikomas begin to chat away about the Individual Eleven.

While talking in their new "forum", Batou and Togusa appear and take one of the Tachikomas - who just happens to be Batou's pet - with them to Spring-8 to look at the scientific evidence gathered on the Individual Eleven.