The next generation comes into play, as the children of both Jacob Clarke and Jesse Keys become the focus of both a government investigation and alien interest.

Charlie and Lisa learn about their daughter Allie's amazing powers while trapped in a perilous situation. Mary Crawford lays the groundwork to snatch the child for government research.

General Beers kidnaps Allie, an alien-hybrid, and plans to use her as bait to lure the aliens into his trap.