Kluke has woken up and is good now. Shu and the others continue their journey to the book of origins. Now Shu and the others are in logic city in their journey.

Cynthia has grown jealous of Bouquet's beauty. This causes her to seek out and eliminate her. A fight on the narrow path causes everyone to fall into Death Valley. Bouquet brings out her Hippopotamus shadow to turn into a ball...which ends up scattering everyone. As Shu and Co. evade the experimented creatures there, Cynthia learns from Andropov that the fog there has softened the cliff sides to the point where it is impossible to climb. As Andropov tries to find a way out for Cynthia, Bouquet and Hippopotamus secretly follow her to find a way out with Bouquet leaving a trail of her clothes for the others to follow. When her cover ends up blown near the exit of Death Valley, Cynthia attacks. Things weren't looking good for Bouquet and Hippopotamus. When Shu and Co. arrive, Cynthia retreats.

After Gilliam, Todd, Bishop, and Cynthia's defeat, General Logi sends Andropov, Lemaire, and Schneider to take on Shu and Co. Zola faces off against Lemaire while Jiro and Marumaro fight Andropov and Schneider. Lemaire has Deucalion use its bazooka attack to create a crater where Lemaire will have the advantage in. Shu faces off against General Logi. With Lemaire defeated by Zola, Kluke goes to help Shu while Bouquet infiltrates Logi's ship.

While traveling through the desert, Shu, Bouquet, Marumaro, and Noi come across a ghost town after a mirage incident. When Shu, Marumaro, and Noi find a girl they are attracted to, they get into a fight where Bouquet had to use Hippopotamus' shape-shifting ability to break it up. When Bouquet suddenly falls ill, Shu, Jiro, and Marumaro evade the ghost town's ghosts until they see a flying spider-like creature. They go after it on the back of Saber Tiger. When the giant spider causes a rockslide that brings to life rock monsters, Shu unleashes Blue Dragon who alongside Saber Tiger destroys the rock monsters. When Saber Tiger impales its abdomen with his attack, it unleashes a multicolored water that submerges them. While underwater, Shu notices a green plant and they head toward it while evading giant killer fish. They managed to make a hasty retreat to the surface. As Shu and Marumaro dive back in, Noi turns into his black dragon form and joins them. As Shu and Marumaro hold off the giant killer fish, Noi discovers that the green plant is alive. Blue Dragon manages to yank it out of the ground draining the water. They then end up back at where the scene of their mirage occurred in which it was all a dream.

Shu, Bouquet, Marumaro, and Noi help two female bakers prepare a cake display for a town event to earn some money. But there are delays in the kitchen, and Noi and Bouquet has to stall the crowd until they are done. With help from Shu, they complete the cake display and use Saber Tiger to transport it there. When Blue Dragon bursts out the cake scaring the kids, Bouquet improvises by having Hippopotamus dress up as a superhero called Hipopotaman to fight Blue Dragon. Marumaro has Saber Tiger join the act to help Hipopotaman fight Blue Dragon. This only agitates Blue Dragon in the end who makes sure the party "ends with a bang".

General Logi's base is attacked by White Guardians. Kluke, Marumaro, Bouquet, and Andropov unleash their shadows. Kluke has Andropov use Alubujem to locate Shu who is still fighting the White Guardian soldiers in his area. When the others catch up, Shu comes up with a plan. Noi assumes his dragon form and merges with Shu while Bouquet and Hippopotamus merge with Saber Tiger. General Logi unleashes his giant exo-suit soldiers to help fight the White Guardians. The White Guardians' air force starts to turn the tides against giant exo-suits. Delphinium and Deathroy continue their infiltration until they are teleported outside by Matilda and Zephyrus. Meanwhile at their floating city, the Investiture Beings discuss about the war between the White Guardians and the forces of Rosekstan. As the battle rages on, Kluke uses Phoenix's ability to teleport her, Marumaro and the Bouquet/Saber Tiger, and some White Guardian soldiers away from Shu and the Noi/Blue Dragon. Jiro and Xie arrive and join the battle. Meanwhile, Deathroy unleashes Chimera against Matilda and Zephyrus. Vermillion confronts Shu and the Noi/Blue Dragon and starts to attack. As White Guardian soldiers charge toward General Logi's hideout, they are attacked by General Logi and Odin.

At Rosekstan, Primella has a vision of a three-way battle between the White Guardian, Shu, and Fagino and a vision where Lotarus kills Kluke in a flower field. Meanwhile, Shu and the Noi/Blue Dragon and Marumaro and the Bouquet/Saber Tiger are in combat with Hildegard. Hildegard then assumes his dragon form as the Noi/Blue Dragon goes after him. Though Hildegard gets away. At a Rosekstan base, General Logi thinks back to the battle against the White Guardians when Matilda enters telling Logi that Delphinium and Deathroy have surrendered to them. Shu, Bouquet, Marumaro, and Noi arrive in a nearby town where they notice a factory. Back at Rosekstan's base, Delphinium is being interrogated by Captain Varenko.