Team Scorpion’s job to find sunken treasure goes awry when Walter and Paige’s boat explodes, leaving them lost in the middle of the Pacific Ocean surrounded by sharks.

When poachers almost kill a pregnant endangered deer, Team Scorpion recreates the animal’s womb to try to save it and its baby’s life. Also, Happy and Toby discuss the future of their family.

While decommissioning an old nuclear missile, a simple accident causes Team Scorpion to endure exposure to toxic vapor while trying to prevent the nuke from detonating. Also, Paige confronts Happy about constantly tagging along with her and Walter.

While tracking a device that can prevent a nuclear meltdown through the Los Angeles sewers, Walter learns the nuances of listening and not offering advice to Paige. Also, Team Scorpion meets Florence, their new neighbor at the garage, after she sends a mix of smelly chemicals through their shared ventilation as a warning to keep the noise down.

On Christmas Eve, when Walter chooses work over spending quality time with his friends, he falls down the stairs and hits his head, and as he lays unconscious, he enters a dream world where Team Scorpion never existed.

A solar storm knocks out power in Los Angeles, and Team Scorpion must help a teen pilot and his girlfriend who are lost over the Pacific without navigation or radio contact. Also, during the crisis, Walter must look after a group of Ralph’s classmates, and Cabe tries to tell Allie finally that he loves her.

On Valentine's Day, Team Scorpion must set aside their romantic plans to help a doctor and pilot trapped inside a helicopter that crashed atop a skyscraper. Also, Toby and Happy wait for news on their fertility results, and Sylvester realizes that he may have feelings for Florence.

Team Scorpion heads to the bayou to track down a cagey alligator in order to stop a deadly mosquito-borne virus, and Paige teaches Walter the concept of the “white lie.” Also, Walter hits Cabe with a tranquilizer gun and Toby must save his life, and Sylvester and Ralph help Patty when the mean girls at her school force her to get a dreaded tardy slip.

Team Scorpion must use their high IQs to win a softball game when the homeland director challenges, with all of their future government contracts on the line. Also, Walter’s secret night out with Florence puts Toby and Happy on edge.

Paige’s maternal side goes into high gear when Team Scorpion must save an unconscious, hypothermic boy stuck in the wheel well of their airborne airplane. Also, Walter’s white lie to Paige starts to take a toll on him, and Paige realizes something’s up.