Guy prepares to use a forbidden secret jutsu. Meanwhile, Naruto falls under Itachi’s genjutsu, and all the anti-genjutsu training he underwent with Jiraiya races through Naruto’s mind.

Granny Chiyo and Sakura manage to expose Sasori, who amazingly looks no older than he did twenty years earlier.

Sakura and Granny Chiyo are engaged in a fierce battle with Sasori, who is able turn himself into a human puppet. They somehow bring Sasori down within the time limit, but he ends up reviving.

Sakura sees Sai drawing by the river and finds out that Sai has artistic talent but has never given titles to anything he ever drew. Naruto and Sakura begin to realize the reason behind Sai's repulsive personality. After the hot springs, the team heads off to the bridge to meet the spy. Yamato is suspicious of traps so they go off the main road into the forest. Camping for the night, Yamato then creates a two story house by again using his Mokuton jutsu. Inside this house, the team formulates their plan.

Sai receives a chilling glare from Sasuke's Sharingan that frightens him. Sai gives Orochimaru a bundle with information about Konoha's ANBU. Yamato gives Sakura and Naruto seeds with his chakra that enables him to track them inside the lair, and reveals that he was able to track Sai because he put a seed in Sai's clothing and food during the visit to the hot springs. Kabuto locks Sai in a room, and the boy summons a bingo book from scrolls he carries. Yamato uses a jutsu to open a tunnel into Orochimaru's hideout, and he, Naruto and Sakura travel to Sai's room undetected.

Asuma supervises Naruto and Sora's wind chakra training, and notices that Sora, like Naruto, has very powerful chakra. Tsunade and Yamato learn from Chiriku that Sora was inadvertently responsible for an incident in which the Temple of Fire was destroyed. Later, Asuma gives Sora a claw made from the same materials as his chakra blades. It is revealed that Asuma killed Sora's father Kazuma, who had planned to kill the Hokage. Furido then approaches Sora, telling him that Asuma is responsible for his father's death and passing him two "king" pieces from a Shogi set for Asuma. Danzo mysteriously disappears. Naruto approaches a furious Sora in the training grounds, who easily throws a chakra-powered kunai through a tree and destroys the stone behind it.

Asuma’s team reaches the bounty station and ambushes Hidan. Izumo and Kotetsu attack Hidan, but are unable to kill him despite stabbing his vital organs. Asuma tells his teammates that if they retreat they will be killed and Konoha will be endangered. Shikamaru realizes that Asuma is considering sacrificing himself to help defeat the enemy, based on what he knows of Asuma's shogi strategy. Asuma begins fighting Hidan, while Shikamaru distracts him by forcing him to dodge Shadow Sewing. Hidan cuts Asuma on the cheek and steps into a circle of blood as Asuma uses a jutsu to engulf Hidan in a cloud of ash. Asuma then sets the cloud ablaze, supposedly killing Hidan.

In Konoha, Tsunade discovers they have an enemy using Crystal Style. While on his mission with Team Kakashi, Naruto meets Yūkimaru once again and talks to him. Guren puts a gigantic Crystal Prison over the forest trapping Team Kurenai inside. Guren then prepares six Crystal Clones and attacks Team Kurenai with them. Hinata defeats one clone but is locked up in a Crystal Prison by another. Team Kakashi reaches the borders of the giant prison and Naruto uses his new Jutsu with Gamatatsu to bust a way in.

Kabuto plans on breaking Leaf’s The Four-Corner Sealing Barrier from the inside by using Yukimaru’s power and have the Three-Tailed Beast go on a rampage.

The sealing team continue their efforts to seal the Sanbi while Kakashi and the others face against a monster fused together by Kigiri, Nurari and Kihou. Kabuto reveals Orochimaru's plans involving the Sanbi and he and Naruto begin to fight. While protecting Yukimaru, Guren fights against the real Rinji, who has been resurrected by Kabuto. When Guren sacrifices her life to save Yukimaru, Yukimaru's powers go into full effect. Now, in order to protect Yukimaru, Naruto prepares to go against the rampaging Sanbi.

After successfully breaking out of Itachi's Tsukiyomi, Sasuke gains the upper hand on his weakened brother. With no other alternative, Itachi activates his second Mangekyo ability, Amaterasu, a black flame said to burn forever.

Naruto thinks back to the time when Team 7 was on a mission to capture a group of thieves who stole a golden statue. When making a move on the thieves, Naruto and Sasuke had managed to take back the statue but were separated from Sakura, who was captured. On top of that, the thieves' leader had used a special thread-like technique to bind one of Naruto's hands to one of Sasuke's. Literally stuck to each other, would Naruto and Sasuke be able to work together to save Sakura and keep the golden statue safe at the same time?

Naruto and Sasuke have both become such high-level shinobi that each knows exactly what the other is thinking just by exchanging attacks. Despite knowing how Naruto feels, Sasuke is determined to cut him down.