Yūkimaru falters and the Three-Tails injures Guren. Rinji tells Yūkimaru to suppress the beast to save her, but he is unable to do so. Guren leaves her position and protects Yūkimaru with a Crystal Style shield. Naruto goes out to find Yūkimaru, but ends up fighting the Three-Tails with Guren. Despite their efforts to defeat it, the beast overpowers the two of them, and then it proceeds to swallow them. Meanwhile, Kakashi, Shino and Sai find Yūkimaru unconcious and flee with him, leaving Kabuto frustrated.

The Sealing Team prepared to start sealing the Three-Tails and tell Sai to take Yūkimaru somewhere safe, but he gets attacked by Kabuto's men. Kabuto meanwhile prepares his plans while Lee, Tenten, and Kiba are also attacked. Rinji finds his men and converts them back to his side, ordering them to attack the Sealing Team; they're stopped by Kakashi, Yamato and Shino. Rinji then makes Yūkimaru eat the pills to control the Three-Tails, which Naruto and Guren learn about.

Orochimaru reveals the true, hideous form his body has taken from years of experimenting on his body. Can Sasuke defeat this menacing form, or does Orochimaru still have a few tricks up his sleeves?

Having successfully recruited Karin, Sasuke seeks out the final member for his platoon, Jugo. Karin warns Sasuke and Suigetsu of Jugo's uncontrollable murderous instincts, but as they arrive at the northern hideout, they find another matter they must attend to first. Elsewhere, shocking news reaches the ninja of Konoha.

As Sasuke has finally fulfilled his goal in killing Itachi and avenging his clan, he collapses from exhaustion. The news of his victory reaches the Leaf ninja and Tobi, who both race towards Sasuke's location. What does Tobi plan to do with him and who will reach Sasuke first?

As Naruto heads back to the Tsuchigumo Clan village, Akaboshi and his group find Hotaru with the help of Hotaru's uncle. Hotaru manages to escape but the ninja bandits surround her in the forest. Utakata comes to her aid and manages to take her and escape from the ninja bandits. Akaboshi and his group are about to chase after them until their boss arrives and reveals to them that Utakata is in the Hidden Mist Village's Bingo Book.

After reading Jiraiya's first book, Naruto becomes more determined than ever to complete his training. Elsewhere, the angered Raikage plans to call all of the kage together for a meeting.

Deciding to believe in Naruto, Nagato uses the Gedo Art: Rinne Rebirth jutsu, expending the last of his chakra, and thus giving his life, to revive every person in the village who died in the attack, saying that it's the least he can do. With Nagato dead, Konan leaves Akatsuki, taking Nagato and Pain's God Realm (who is actually the body of Yahiko) with her, parting with Naruto saying that since Nagato believed in him to achieve true peace, she will as well. As Naruto returns to the Leaf, he is astonished to find the entire village awaiting his return, hailing him as a true hero. After all these years, Naruto has finally received the acknowledgment he's always wanted.

Kakashi has a flashback back when he was assigned to be the sensei of Team 7. In a bid to know his students, Naruto, Sasuke & Sakura, better, Kakashi spies on them and to see how they would all get along as a group. Angered by Sakura's talk about calling Naruto a brat and that he has no family to tell him right or wrong, Sasuke tells Sakura she is annoying. Realizing Sakura's sadness, Naruto goes to battle Sasuke, but gets defeated. It then goes back to the present and Kakashi claims that it is up to him to stop Sasuke.

In the past, Naruto and Sakura joined Sasuke on a mission to collect the paw print of Nekomata, a large and powerful two-tailed ninja cat that ruled over all of the ninja cats.

Sasuke has a flashback while traveling to Konoha with his team, Taka. He once saved a girl named Naho not knowing that she's a relative of the Feudal Lord. Meanwhile, Naruto and Sakura are sent on a mission to accompany Naho and act as her bodyguards while Kakashi and Sasuke are sent to discover the reason why internationally wanted bandits have entered their border. Kakashi and Sasuke later find out that the bandits intend to abduct Naho. Naruto and Sakura are defeated by the bandits and are taken hostage. Sasuke finds them first and proceeds to defeat the leader and mercilessly punches him because of his jealousy for Naruto's growing power. A cut to the present reveals Naruto contemplating on his promise to have Sasuke return to the village.

Sakura, not wanting to cause Naruto any more pain, tells him that he can let go of his promise about bringing Sasuke back, and claims that she doesn't feel anything more for Sasuke. To top it off, Sakura confesses her feelings for Naruto, taking everyone by surprise. How will Naruto respond? Meanwhile, Kisame tracks down Killer Bee and the battle for the Eight-Tails begins.

Naruto reproaches Sasuke for attempting to kill Sakura. Then Sasuke reveals that he killed Danzo with his own hands. He goes on to declare his intent to purify the Uchiha clan’s name by annihilating the Hidden Leaf.

Tsunade leaves her post as Medic Ninja to join the other Kage in fighting Madara. Meanwhile, Sasuke goes after Itachi and learns that his brother intends on stopping Kabuto’s Reanimation Jutsu.

Kakashi discovers a strange connection between the masked man’s Transportation Technique and his own Kamui Jutsu. Naruto throws everything he’s got against the masked man and breaks his mask, finally revealing his identity!

At the Foundation, Kakashi meets a boy who uses Wood Style, a jutsu that only First Hokage Hashirama was capable of using. Kakashi goes to Third Hokage Hiruzen’s library to seek answers and discovers records regarding Hashirama’s cells.

Villages did not exist when Hashirama was a child. It was during this strife-filled time that he met Madara Uchiha.

Part 1 of a special two-part extra edition! The townspeople are going about their daily business on the streets of the Leaf Village when someone suddenly appears and starts sending them flying!

Ino, Sakura and Choji trudge across a desert under the blazing sun without any provisions. Ino and Sakura are arguing when a giant scorpion attacks and injures Sakura.

Madara now possesses the Rinnegan in both eyes, and he is the strongest, most despicable enemy the newly reunited Team 7 has ever faced. Kakashi calls upon Team 7 to recall their first lesson with the bells, and to use teamwork!

Karin is caught within the Infinite Tsukuyomi and dreams of her past. She was born into the Uzumaki Clan and has the unique ability to heal anyone who bites into her. Driven out of her village, the Hidden Grass takes her in, only to use her for this ability. Karin has no choice but to endure constant suffering in order to survive. She is later chosen to enter the Chunin Exams, where Sasuke saves her life. Karin has never forgotten what he did for her—or his smile.

The Masked Man shows Neji and Naruto images of past incidents that occurred in the Leaf Village. Meanwhile, Shikamaru and friends join up with Team Jiraiya to rescue the children. After fighting side by side with the Leaf, Yahiko and the others seem to have a change of heart.

Sasuke and Sakura join up with the others, but the Puppet User appears and blocks their path back to the Hidden Leaf Village. Sasuke wants to bring down the puppets and rush back to report to the Fourth Hokage, but Shikamaru and the others insist on staying and rescuing the jonin.

Jiraiya weakens the seal on the Nine Tails in order to help Naruto learn how to control the Tailed Beast's power. Jiraiya recalls the words spoken to him years ago by the Great Lord Elder. He told Jiraiya that he would have a student, and that his guidance would decide whether the student would save the Ninja World or destroy it.

The Anbu who attack Naruto and Shikamaru are agents sent by Danzo, who had promised Orochimaru that he would deliver Sasuke safely to him. Luckily, Neji, Lee and Tenten rush to their aid in the nick of time! Meanwhile, Hiruko reveals the truth behind the incident involving Hizashi

Several months after Pain’s attack, Jiraiya arrives with intel regarding the Akatsuki, who are attacking shinobi villages and kidnapping their Kage and jonin. He also reveals that Sasuke is working with them. Naruto is determined to bring his friend and comrade Sasuke back, once and for all!

Everyone believes that Indra is the best choice to be Hagomoro's successor, and the sage's indecision begins to cause anxiety among his followers. Finally, Ashura returns home, and Hagoromo reveals who he has chosen.