While talking with his students, Shino talks about how he and his team got together and became more close as friends and teammates. The story switches to Shino's flashback during the first part of Naruto. They are on a mission assigned by Kurenai in which a Jonin assassin from a neighboring village. Shino gets defeated because of weak taijutsu and descends into depression. He even reveals he was going to abandon the team that helped him because he didn't think he was useful to them. But after his friends get in trouble with the rouge Shino comes back and defeats the rouge.

Taking place in the aftermath of the Kage Summit, Team Kakashi is sent out on a mission by Tsunade to a location known as "The Hole" to investigate an incident where its people were killed.

While the Saezuri is revealed, learning that Disonasu employed Kabuto Yakushi to wipe out the residents of Tonika Village, Dokku tried to attack Disonasu, but stopped by a reincarnated puppet and restrained by a resurrected Takigakure shinobi.

A reanimated boy who can control weather appears before Team Ino-Shika-Cho, Sakura, and Kiba, who are all fighting in different locations. To their surprise, the boy seems to know them.

The Five Kage are outmatched by the real Madara Uchiha’s devastating attacks. Just when Third Tsuchikage Ohnoki is about to give up, he remembers the words of the previous Tsuchikage.

Kabuto’s past is finally revealed. As child, a woman named Nonou raised Kabuto at an orphanage in the Leaf Village. One day, Danzo and Orochimaru visit the orphanage to provide financial aid under the condition that Nonou work as their spy.

The Allied Shinobi Forces begin their onslaught against Obito and Madara. But Ten Tails suddenly transforms and hurls powerful Tailed Beast Bombs toward distant towns.

Naruto's past, thoughts, and feelings flow into the consciousness of every shinobi, unifying their hearts.

Ino and Choji fight to protect an immobilized Sakura although they have depleted most of their chakra due to the relentless fighting.