One day, Boruto and Konohamaru rescue Remon Yoimura from an attack. Remon says she has come to Hidden Leaf Village for sightseeing. Boruto and Konohamaru offer to show her around the Leaf and provide some protection as well.

Urashiki is determined to get Shukaku's chakra and attacks ruthlessly. Boruto and Shinki form a united front and unleash each of their special jutsu. However, Urashiki proves to be a formidable opponent that neither Sasuke nor Gaara could defeat. Will Boruto and Shinki be able to find a way to counter him?

Urashiki appears to steal the chakra of Nine Tails from Naruto, but his attempt is unsuccessful. In order to save Naruto, Boruto, Sasuke and Jiraiya pursue Urashiki. Jiraiya then notices that the malevolent Nine Tails Chakra has started filling the air.

Boruto and his team try to get Kokuri assigned to the same cell, but the warden, Benga, shuts the idea down. Looking for a weakness in Benga, they approach Doragu, the leader among the prisoners, for information they can exploit. Doragu is willing to give them information, but in exchange Boruto and the team must undergo a test of perseverance.

Tsubaki, Sumire’s replacement on Team 15, is proud of her samurai upbringing and is highly skilled, but her team’s overall mission performance is lackluster. Tsubaki devises a plan to hone her team’s skills, where they fight for who performs best on missions.

Shikadai, Inojin, and Cho-Cho's Team 10 is assigned to a joint mission with Shinki, Yodo, and Araya from the Hidden Sand. The mission is to find and retrieve an Otsutsuki Puppet that Shikadai had once fought. Team 10 arrives in the Land of Wind and decide to stop at a certain shop. On their way, a man passes them who piques Shikadai's interest. Upon arriving, a chilling scene confronts the trio.

Boruto and Sarada rush to Victor's research lab where they find a horrifying plant stealing the chakra of the people near it. As they work with Konohamaru to try to bring it under control, Deepa appears!

Separated from Boruto and Sarada, Konohamaru battles Victor. But someone unexpected shows up to fight alongside him. Meanwhile, Boruto and Sarada are trying to defeat Deepa to even the score, but he still proves to be a formidable opponent despite all of their training.

Team 7 has arrived at a high-tech research center along with Katasuke. There, they end up running into some familiar faces. The mission has ended without incident, and Boruto is ready to head home. However, there’s more they must do. Boruto and his friends end up cooperating in a test-run of a Scientific Ninja Tool that is under development. Boruto is unhappy at first, but as the test run continues his feelings start to change. As that happens, Team 7 is given a new urgent assignment from the Hokage.

The reformed Team 7 launches a series of attacks on Boro. But even when they land successful attacks, Boro instantly revives himself with his extraordinary regeneration powers.

Koji Kashin continues his battle with Jigen, whose body is revealed to have been taken over by Isshiki Otsutsuki. He continuously hits Jigen with a barrage of attacks in an attempt to drag Isshiki out of his body and destroy him.

Boruto dozes off on Thunder Train and wakes up in an unfamiliar location along with the other passengers. A mysterious individual known as Ouga forces them to participate in a game of death disguised as an experiment—who will successfully beat this game and make it out alive?!

A swarm of dragon-beasts suddenly appears at the Observatory, throwing everything into chaos. When Sasuke and Sakura learn that the director, Zansul, has horrifying ambitions, they split up to try to stop him. Sakura gets back to the Observatory first, but the building collapses while she’s still inside. Meanwhile, Sasuke catches sight of Zansul and his accomplices. He tries to join up with Sakura but is unable to find her. Trapped, Sakura faces a precarious dilemma.

Will Sasuke and Sakura—the most powerful couple in the Village Hidden in the Leaves—be able to crush Zansul’s ambitions and safely return with the Ultra Particles to save their friend?

Due to the risk that Code might attempt to kill Boruto and Kawaki, guards are assigned to them. Boruto is sick of being watched every day. Meanwhile, Kawaki overhears a conversation between Shikadai and Inojin and learns how to slip past his guard and the Village’s sensory system. Once he decides he must do whatever it takes to protect Naruto and the Hidden Leaf, he jumps into action. Despite their keen sensory abilities, Naruto and the Village’s sensory team are unaware of what’s happening. But Boruto feels a strange sensation that allows him to detect Kawaki’s movements.

Boruto makes a desperate decision to prevent Momoshiki from taking over his consciousness again. Meanwhile, Kawaki drives back Code using the Karma that Amado revived. Willing to do whatever it takes to eliminate anyone who is a threat to Naruto, Kawaki fights with overwhelming power. Shikamaru is shocked by his strength, and Code learns the difference in their powers. Boruto and Kawaki have overcome various obstacles as brothers, but a troubling shadow begins to loom over their relationship. As Momoshiki once said, the fateful moment that will take everything from Boruto is approaching!