Boruto, Sarada, and Mitsuki go meet with Ikada, who has now sided against the Land of Water. Boruto tries talking to Ikada as a friend to get him to stop fighting. But since Boruto is responsible for what happened to his sister Seiren, Ikada refuses to listen. Even still, Boruto persistently tries to reason with him. Ikada coldly proposes a certain condition.

Boruto and the others return safely to the Leaf Village. While Naruto informs Team 7 of events that have occurred in the Hidden Mist since they left, Boruto and Kawaki get into an argument over whether or not Ikada should be punished.

Naruto has been asked to play himself in the popular Evil Jammer Kagemasa shinobi movie series. Konohamaru ends up playing the role in his place. Since this is his first movie appearance and the fact that he will be playing the Seventh Hokage, someone he looks up to, Konohamaru goes all out. However, he’s troubled when production doesn’t quite go as he expected. Upon hearing something from the assistant director, he proposes something to make the movie more enjoyable.

Mitsuki worries when Mikazuki the cat goes missing. Mitsuki, Boruto, and Sarada are assisting with the village patrol at the request of the police department, which is having difficulty investigating a strange series of attacks. From morning until night, Mitsuki spends his days on patrol, when one day, he sees Mikazuki being cared for by another person and being called by another name!

Kawaki enrolls at the Ninja Academy and begins classes as a freshman with Himawari and the others. But it’s actually a secret mission to protect a princess from assassins. This is kept a secret because she’s come from abroad to study. Since it is a personal request from Naruto, Kawaki decides to attend the academy hesitantly, where the students are younger than him. Kawaki’s difficult school life with an unreliable teacher named Hana Kaka and his unique young classmates begins!

After learning about the “Seven Mysteries” at the Ninja Academy, Himawari and several of her classmates decide to go investigate at night. Kae is among the participants, so Kawaki has no choice but to go along. But he learns that Kae does not believe in the Seven Wonders and is trying to create a fake phenomenon for the students who are looking forward to the expedition. Seeing Kae’s eagerness and excitement, Kawaki decides to help her until the end, but then something mysterious and unexpected occurs.

Osuka Kamakura is kidnapped for ransom along with Himawari. When the ringleader finds out she’s the daughter of the Hokage, he starts thinking of ways to use her to his advantage as well. Meanwhile, Kawaki does what he can to locate Himawari and Osuka with the help of Kae and Neon Asakusa

Hana, who has recovered from her injuries, and Kawaki, who is back guarding Kae, return to class. Life at the Academy gradually goes back to normal. Meanwhile, Hana learns that about the attempt made on Kae’s life and regrets her inability to prevent it. She returns to the scene of the incident to recount what occurred.

The assassin targeting Kae has finally been revealed. Because of their previous clashes, Kawaki knows they are a powerful foe. He decides to chase after the assassin by himself to prevent putting any more students in danger. But Kawaki finds it difficult to do that without knowing where the assassin is; what’s more, his classmates desire to work together to chase down the assassin and save Kae. And so, the entire class begins their pursuit!

Boruto accompanies Sasuke to a hawk trainer to obtain a messenger hawk.

There, Boruto and Sasuke hear about a person who sells rare animals and decide to investigate. Boruto then befriends a boy named Tsuzura Shitakiri. Because of his mother, Tsuzura doesn’t go to school and has given up on the things he really wants to do. His only friend is a hawk that is unable to fly due to an injury. He takes good care of this hawk in the hope that it can soar the skies once again.

Boruto dozes off on Thunder Train and wakes up in an unfamiliar location along with the other passengers. A mysterious individual known as Ouga forces them to participate in a game of death disguised as an experiment—who will successfully beat this game and make it out alive?!

Boruto reawakens to find he’s back where he first found himself.

Sasuke is attacked by Meno, the guardian of the Observatory, and then poisoned. Just when he thinks it’s all over, he is rescued by Sakura, who has infiltrated the Observatory as a doctor. She gets Sasuke reassigned to assist her, and they begin their undercover investigation. From the intel that Sakura brings, they learn that Ultra Particles were what cured the Sage of the Six Paths, but in order to find out where it is located, they need to obtain a document called the Map of the Heavens. They decide to search the Observatory’s library for it.

Sasuke and Sakura work together to gather information concerning the Ultra Particles. Unfortunately, there is still much they don’t know, and they are unable to figure out where to get answers. Eventually, Sasuke finds a clue to the whereabouts of the Ultra Particles from something his cellmate mentions. Meanwhile, Sakura discovers a hint to unraveling the mystery of the Map of the Heavens from a game called Star Lines. Having finally gathered the information they need, Sasuke and Sakura try to obtain the Ultra Particles. However…

Code worships Isshiki Otsutsuki, who was defeated by Boruto and his friends. In order to meet a certain person, he visits the facility that formerly belonged to Boro. Like Kawaki, Code miraculously survived the experiments intended to help select a vessel for Isshiki—and he possesses greater power than even Jigen. He has vowed revenge against Boruto and Kawaki for destroying Isshiki.

Meanwhile, Claw Marks left by Code are discovered just outside of the Hidden Leaf Village. While the Hokage and the others take precautions, Boruto proposes an idea to Kawaki.

Boruto arrives to help Kawaki defeat Code. In order to match Code’s incredible combat abilities, Boruto activates his Karma. In response, Code activates his own Karma. As the battle intensifies, Kawaki becomes worried that Momoshiki might take control of Boruto’s consciousness. Meanwhile, in the Hidden Leaf Village, Boruto and Kawaki had disappeared without anyone noticing. Naruto decides to do his own investigation to find out where they went.

Boruto makes a desperate decision to prevent Momoshiki from taking over his consciousness again. Meanwhile, Kawaki drives back Code using the Karma that Amado revived. Willing to do whatever it takes to eliminate anyone who is a threat to Naruto, Kawaki fights with overwhelming power. Shikamaru is shocked by his strength, and Code learns the difference in their powers. Boruto and Kawaki have overcome various obstacles as brothers, but a troubling shadow begins to loom over their relationship. As Momoshiki once said, the fateful moment that will take everything from Boruto is approaching!